BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014D02LP1|AL426671
(784 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1481 1554 0.0
>3x_Contig1481
Length = 8252
Score = 1554 bits (784), Expect = 0.0
Identities = 784/784 (100%)
Strand = Plus / Minus
Query: 1 aactcctataatgaaactaggagtaagcactggaagggccactgctgcggcacgtccaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5683 aactcctataatgaaactaggagtaagcactggaagggccactgctgcggcacgtccaga 5624
Query: 61 tttcgaggatgttgtcgataatgacgatgaggtcccagtagaagaagagaatcctaagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5623 tttcgaggatgttgtcgataatgacgatgaggtcccagtagaagaagagaatcctaagga 5564
Query: 121 cgaagatgaaatcgattttaagaaagataaattcatcaagcaagtcggtaaaaagaaaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5563 cgaagatgaaatcgattttaagaaagataaattcatcaagcaagtcggtaaaaagaaaac 5504
Query: 181 caaatccaaaacaaagaaagtttcttccaagaagtaataaaatgcagttcgtaacatcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5503 caaatccaaaacaaagaaagtttcttccaagaagtaataaaatgcagttcgtaacatcta 5444
Query: 241 taaaaactattctaaactgtctaacctccctaaaaaggcatccttaatccaaaaatatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5443 taaaaactattctaaactgtctaacctccctaaaaaggcatccttaatccaaaaatatat 5384
Query: 301 cttctcatataccattctttgagcattgtggaaataaattgagtggtcggaatctgggaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5383 cttctcatataccattctttgagcattgtggaaataaattgagtggtcggaatctgggaa 5324
Query: 361 tatatgcatgtcataattccgaacactatgcaaattaaaattgtctattagttcataagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5323 tatatgcatgtcataattccgaacactatgcaaattaaaattgtctattagttcataagt 5264
Query: 421 attctggatgtggacgttatcatctgccgtaccgtgcatcaacagaaatctttttgtgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5263 attctggatgtggacgttatcatctgccgtaccgtgcatcaacagaaatctttttgtgaa 5204
Query: 481 cttgaaggagtcatagtctttgattttagcgtttttgtcatatgcatctgatgaaagggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5203 cttgaaggagtcatagtctttgattttagcgtttttgtcatatgcatctgatgaaagggg 5144
Query: 541 tgaccccaaatatctttcagaatatactgaatcgtaatatttccagtcagtcaccggagc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5143 tgaccccaaatatctttcagaatatactgaatcgtaatatttccagtcagtcaccggagc 5084
Query: 601 aacagaaactccatatttaaaaacacttcctttatcaaattcaagggttttcaaagtggt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5083 aacagaaactccatatttaaaaacacttcctttatcaaattcaagggttttcaaagtggt 5024
Query: 661 aaaacctccgtatgaccatccccatattgctaccttgtcttgggcaattacatccttttg 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5023 aaaacctccgtatgaccatccccatattgctaccttgtcttgggcaattacatccttttg 4964
Query: 721 agtttcgatgtacttttttgtgacattaatgatatcacggggttcccagaagccgatgtt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4963 agtttcgatgtacttttttgtgacattaatgatatcacggggttcccagaagccgatgtt 4904
Query: 781 tctg 784
||||
Sbjct: 4903 tctg 4900
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6989
Number of Sequences: 1807
Number of extensions: 6989
Number of successful extensions: 55
Number of sequences better than 1.0e-20: 1
length of query: 784
length of database: 10,358,551
effective HSP length: 16
effective length of query: 768
effective length of database: 10,329,639
effective search space: 7933162752
effective search space used: 7933162752
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)